Banner

GWAS-related eQTLs across different cancer types

We identified 337,131 eQTLs that overlap with GWAS linkage disequilibrium (LD) regions (r² ≥ 0.5).



e.g., "STAD"
e.g., "r²>= 0.8"
e.g., "rs2273"
Cancer type
eQTL type
tagSNP
LD
SNP ID
SNP position (hg19)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-value
GWAS-Traits
BLCA cis rs2243480 1 rs778704 chr7:65863467 CCT6P1 chr7:65216092-65228661:+ 0.37 4.98 9.6E-7 Diabetic kidney disease
BLCA cis rs2243480 1 rs7787230 chr7:65629099 CCT6P1 chr7:65216092-65228661:+ -0.35 -4.71 3.52E-6 Diabetic kidney disease
BLCA cis rs2243480 1 rs778729 chr7:65824419 CCT6P1 chr7:65216092-65228661:+ 0.36 4.92 1.29E-6 Diabetic kidney disease
BLCA cis rs6545883 1 rs778758 chr2:61782161 AHSA2 chr2:61404553-61414058:+ -0.2 -5.49 7.31E-8 Tuberculosis
BLCA cis rs6545883 1 rs778758 chr2:61782161 C2orf74 chr2:61372243-61391964:+ 0.38 6.37 5.4E-10 Tuberculosis
BLCA cis rs6545883 1 rs778762 chr2:61782921 AHSA2 chr2:61404553-61414058:+ -0.19 -5.2 3.33E-7 Tuberculosis
BLCA cis rs6545883 1 rs778762 chr2:61782921 C2orf74 chr2:61372243-61391964:+ 0.38 6.37 5.33E-10 Tuberculosis
BLCA cis rs6545883 1 rs778763 chr2:61785639 AHSA2 chr2:61404553-61414058:+ -0.2 -5.41 1.14E-7 Tuberculosis
BLCA cis rs6545883 1 rs778763 chr2:61785639 C2orf74 chr2:61372243-61391964:+ 0.38 6.36 5.62E-10 Tuberculosis
BLCA cis rs7789940 1 rs7789940 chr7:75951230 UPK3B chr7:76139745-76157197:+ -0.28 -5.63 3.57E-8 Multiple sclerosis
BLCA cis rs2243480 1 rs7792391 chr7:65773429 CCT6P1 chr7:65216092-65228661:+ -0.35 -4.72 3.24E-6 Diabetic kidney disease
BLCA cis rs2243480 1 rs7794661 chr7:65389730 CCT6P1 chr7:65216092-65228661:+ 0.32 4.47 1.02E-5 Diabetic kidney disease
BLCA cis rs2243480 1 rs7795242 chr7:65390094 CCT6P1 chr7:65216092-65228661:+ 0.31 4.38 1.53E-5 Diabetic kidney disease
BLCA cis rs2243480 1 rs7804223 chr7:65664559 CCT6P1 chr7:65216092-65228661:+ -0.35 -4.75 2.86E-6 Diabetic kidney disease
BLCA cis rs2243480 1 rs781149 chr7:65481284 CCT6P1 chr7:65216092-65228661:+ 0.3 4.33 1.9E-5 Diabetic kidney disease